39 commits

Author	SHA1	Message	Date
Fabian Joswig	b28c2f0b6f	[Fix] Migrate to odrpack because of scipy.odr deprecation (#279) ... * [Fix] Migrate to odrpack because of scipy.odr deprecation in recent release * [Fix] Fix behaviour for rank deficient fits. Add test * [Fix] Relax test_merge_obs tolerance to machine epsilon and update ODR docstring to reference odrpack * [ci] Re-add -Werror to pytest workflow * [Fix] Handle platform-dependent rank-deficient warning in ODR tests * [Fix] Improve rank-deficient detection and bump odrpack to >=0.5 Fix incorrect ODRPACK95 info code parsing: rank deficiency is encoded in the tens digit (info // 10 % 10), not the hundreds digit. Add irank and inv_condnum to the warning message for diagnostics.	2026-04-19 19:50:36 +02:00
Fabian Joswig	23d2629801	[CI] Run pytest workflows once per week (#280)	2026-03-29 20:43:59 +02:00
Fabian Joswig	682d23604d	[Fix] Pandas 3 string type changes (#278) ... * [Fix] Pandas 3 string type handling * [ci] Temporarily remove WError because of scipy deprecation * [Fix] Address edge cases in _deserialize_df - Use pd.isna() instead of truthiness check for gzip null guard, fixing incorrect behavior when null is np.nan (which is truthy in Python) - Add bounds check to while loop to prevent IndexError when all non-null values are empty strings converted to None by regex replace * [Fix] Address edge cases in _deserialize_df and add string dtype tests - Guard against IndexError on empty DataFrames and all-null columns - Use is not None instead of pd.isna() for Obs objects in auto_gamma - Add tests for string dtype columns (with/without None, CSV and SQL) - Add test for empty DataFrame deserialization * [Fix] Avoid skipping NA-to-None conversion and guard auto_gamma against None lists - Replace continue with conditional to preserve NA-to-None conversion for all-null columns - Guard auto_gamma list lambda against None values to prevent TypeError - Add tests for all-empty-string columns and Obs lists with None + auto_gamma	2026-03-29 18:46:15 +02:00
Fabian Joswig	85ae9d7563	[chore] Remove support for python 3.9 and bump python versions in runners (#273)	2025-10-19 12:59:20 +02:00
Fabian Joswig	a600a69bb9	[ci] Add python 3.14 runners for pytest workflow (#270) ... * [ci] Add python 3.14 runners for pytest workflow * [ci] Deactivate -Werror option in pytest workflow to fix python 3.14 runner * [ci] Run tests with Werror for all python versions but for 3.14	2025-10-19 12:44:06 +02:00
Fabian Joswig	d6e6a435a8	[ci] Re-enable fail on warning for pytest pipeline. (#265) ... * [ci] Re-enable fail on warning for pytest pipeline. * [Fix] Use sqlite3 context managers in pandas module. * [Fix] Add closing context.	2025-05-05 17:09:40 +02:00
Fabian Joswig	dd4f8525f7	[CI] Add ARM runner and bump macos runner python version to 3.12 (#260)	2025-02-19 18:23:56 +01:00
Fabian Joswig	7eabd68c5f	[CI] Speed up test workflow install phase by using uv (#254) ... * [CI] Speed up install phase by using uv * [CI] Use uv in examples workflow * [CI] Fix yml syntax * [CI] Install uv into system env * [CI] Add system install for examples workflow	2025-01-10 09:36:05 +01:00
Fabian Joswig	b43a2cbd34	[ci] Add python 3.13 to pytest workflow. (#242) ... * [ci] Add python 3.13 to pytest workflow. * [ci] Remove py and pyarrow from pytest workflow	2024-10-14 23:27:24 +02:00
Fabian Joswig	55cd782909	[Build] Remove python3.8 and add support for numpy 2 (#239) ... * [build] Remove python 3.8 and bump dependency version. * [Build] Remove python 3.8 from ci and update README python badge. * [ci] Temporarily remove -Werror from pytest workflow. * [ci] Remove python 3.8 from examples workflow. * [Build] Bump further dependency versions.	2024-08-22 21:59:07 +02:00
Fabian Joswig	0df5882d1f	[ci] Include python 3.12 in ci after new dateutils release. (#229)	2024-03-01 07:14:01 +01:00
Fabian Joswig	43383acead	[ci] Update actions to use Node.js 20 (#228)	2024-02-06 17:54:33 +01:00
Fabian Joswig	1713ea146a	[ci] Install pyarrow in pytest workflow to silence pandas warnings. (#227)	2024-01-21 12:41:37 +01:00
Fabian Joswig	eb83ff2091	[ci] removed failing pytest 3.12 test for now.	2023-11-10 14:21:35 +01:00
Fabian Joswig	e032412ebd	[ci] Added python 3.12 to pytest and examples workflows. (#212)	2023-10-27 08:39:33 +02:00
Fabian Joswig	2017de0ec7	ci: workflow_dispatch added to pytest and examples workflow.	2023-09-15 09:02:08 +02:00
Fabian Joswig	1b45e71e79	ci: mac-os python version fixed.	2023-06-02 16:17:28 +01:00
Fabian Joswig	cdadbd0fad	ci: windows removed from pytest workflow, mac-os python version bumped ... to 3.10	2023-06-02 16:16:04 +01:00
Fabian Joswig	5b80f44485	ci: pytest workflow updated to fail on warnings.	2023-06-02 15:48:35 +01:00
Fabian Joswig	86c060e79f	ci: python 3.7 removed from ci.	2023-05-21 17:11:38 +01:00
Fabian Joswig	033d8e9ac4	ci: python 3.11 added to pytest workflow, minimal version of h5py bumped ... to 3.8	2023-01-23 10:42:26 +00:00
Fabian Joswig	7bb164120b	tests: fuzzy test for Obs added, test dependencies and documentation ... updated.	2023-01-20 11:44:31 +00:00
Fabian Joswig	5adf29eda9	build: github actions versions updated.	2022-11-30 17:49:01 +00:00
Fabian Joswig	5a7a69d37f	ci: pytest workflow fixed.	2022-10-31 15:42:50 +01:00
Fabian Joswig	4c98bed2ad	ci: fail fast strategy for pytest workflow changed to false.	2022-10-19 13:03:23 +01:00
Fabian Joswig	0d02e4d4b9	build: extract version number in setup.py from version.py	2022-06-14 12:02:43 +01:00
Fabian Joswig	f62581ba69	ci: workflow for caching of binder build added.	2022-05-22 12:02:33 +01:00
Fabian Joswig	6d6d32e0c5	refactor!: minimal python version bumped to 3.7	2022-01-10 15:28:27 +01:00
Fabian Joswig	cd0f38c77d	ci: macOS and windows added to pytest workflow	2022-01-07 11:59:06 +01:00
Fabian Joswig	06f4caf579	ci: python 3.10 added to pytest workflow	2021-12-13 14:54:30 +00:00
Fabian Joswig	9056d369d3	ci: wheel added to pytest workflow	2021-12-10 14:15:40 +00:00
Fabian Joswig	f30fcbd4d9	ci: pytest workflow scheduled to run once a month.	2021-12-09 07:37:42 +00:00
Fabian Joswig	5c9a521c29	ci: scheduled pytest workflow once a day.	2021-12-08 19:54:03 +00:00
Fabian Joswig	e4d7d56180	first version of new bookeeping system	2021-11-01 17:14:30 +00:00
Fabian Joswig	2b51ec9293	pytest workflow cleaned up	2021-11-01 13:45:26 +00:00
Fabian Joswig	01ec78a2a3	install requirements changed in pytest workflow	2021-11-01 13:39:55 +00:00
Fabian Joswig	d44168f6ae	pypy3 added to pytest workflow	2021-11-01 13:35:10 +00:00
Fabian Joswig	02dd41b6b7	python 3.10 added to pytest workflow	2021-11-01 13:19:37 +00:00
Fabian Joswig	b5f3dd6ac3	Benchmarks added	2021-10-26 10:20:47 +01:00

Renamed from .github/workflows/CI.yml (Browse further)