Author	SHA1	Message	Date
fjosw	6f3abd0b36	Merge branch 'develop' into documentation	2023-07-14 13:22:20 +00:00
s-kuberski	6dcd0c3518	feat: Added numerical integration of generic functions (#201) ... * feat: Added numerical integration of generic functions * refactored integration routines * tests: two trivial tests for integration added. * docs: quad docstring corrected. * Small bugfix for integration without obs --------- Co-authored-by: Fabian Joswig <fabian.joswig@ed.ac.uk>	2023-07-14 14:21:59 +01:00
fjosw	328869f300	Merge branch 'develop' into documentation	2023-07-14 12:38:38 +00:00
Fabian Joswig	8736d1cd3c	feat: CObs format added and complex Corr print improved. (#200)	2023-07-14 13:38:21 +01:00
fjosw	f72a2c5f94	Merge branch 'develop' into documentation	2023-07-14 12:12:27 +00:00
Fabian Joswig	b62a18643e	Bootstrap export/import (#198) ... * feat: export_bootstrap method added. * feat: import_bootstrap function added. * tests: first test for import/export bootstrap added. * feat: bootstrap feature cleaned up. * docs: boostrap docstrings improved.	2023-07-14 13:12:11 +01:00
fjosw	9b1f60c00e	Merge branch 'develop' into documentation	2023-07-10 15:33:35 +00:00
Fabian Joswig	db79cb2d95	tests: test for print_config added.	2023-07-10 15:44:06 +01:00
Fabian Joswig	9589820253	tests: coverage for all derivative variants extended.	2023-07-10 15:35:37 +01:00
fjosw	b5eb4a0bfd	Merge branch 'develop' into documentation	2023-06-02 14:04:36 +00:00
Fabian Joswig	525c61ed20	Fix another edge case in _compute_drho (#194) ... * tests: failing test for compute_drho edge case added. * tests: example file for failing compute_drho added. * tests: assertion that dvalue stays the same added to compute drho test. * fix: another edge case in computation of drho fixed.	2023-06-02 15:04:15 +01:00
Justus Kuhlmann	9489b87a7e	fix nan to None test (#192)	2023-06-01 14:07:16 +01:00
fjosw	1802a4ee1c	Merge branch 'develop' into documentation	2023-05-31 17:07:58 +00:00
Fabian Joswig	bb43a8afb7	Fix Obs in f-strings without specifier (#190) ... * fix: Conversion of an array with ndim > 0 to a scalar deprecation fixed. * fix: adjusted maximal value for rho in test_gamma_method_irregular. * fix: obs in f-strings now work again when no specifier is provided.	2023-05-31 18:07:38 +01:00
fjosw	1da8d9183e	Merge branch 'develop' into documentation	2023-05-30 14:29:37 +00:00
s-kuberski	34fe7f44fc	Bug fix for edge case in _compute_drho (#189)	2023-05-30 15:29:22 +01:00
Fabian Joswig	095f7c8a46	fix: adjusted maximal value for rho in test_gamma_method_irregular. (#188)	2023-05-30 14:03:01 +01:00
Fabian Joswig	dc73456759	tests: np.alltrue replaced by np.all.	2023-05-30 12:52:10 +01:00
fjosw	8f392816d5	Merge branch 'develop' into documentation	2023-05-26 12:02:09 +00:00
Justus Kuhlmann	1a811b04f3	Feat/files idl xsf (#185) ... * added kwrg idl to ms5_xsf_read * change output, warn user if expected idl not found	2023-05-26 13:01:52 +01:00
fjosw	20e5a0098f	Merge branch 'develop' into documentation	2023-05-22 11:38:03 +00:00
Justus Kuhlmann	e97cc519a9	taking care of cols with only None values (#184)	2023-05-22 12:37:46 +01:00
fjosw	c34343a17a	Merge branch 'develop' into documentation	2023-05-19 13:59:16 +00:00
s-kuberski	81e4f37934	Restored JSON output of dicts with non-string keys (#179) ... * Restored JSON output of dicts with non-string keys * Use numpy.integer instead of deprecated numpy.int	2023-05-19 14:58:56 +01:00
fjosw	53536e0943	Merge branch 'develop' into documentation	2023-05-18 16:12:07 +00:00
Justus Kuhlmann	a5b6f69160	Slightly better Typechecking when exporting to SQL (#174) ... * corret type clause * add tests, changes in create_json_string * create json-string now gives back None * revert changes * fix panda sql export * add SQL test * fixed None type export for csv and sql.gz * move None parsing to json io * alter regex * revert changes * only replace None with empty str when necessary * fixed deserialze_df for python 3.7 * add more tesets * fix case where gz was ignored * hand voer gz explicitly * replace nan by None in non-Obs columns * moved warning to csv export, mroe tests * only values able to be nan are put in np.isnan() * added python float for warning	2023-05-18 17:11:52 +01:00
fjosw	ae5fbbee3c	Merge branch 'develop' into documentation	2023-05-16 17:37:03 +00:00
s-kuberski	3198088f9c	Feat/flow (#176) ... * fix: String conversion of Obs can now handle a dvalue that is NaN or inf * Feat: Added extraction of w0/a from openQCD files * Removed unnecessary round in w0 routine * Improved error handling in fit_t0 * Allowed to change the reference flow time in t0 and w0 determinations. * Added doc string to fit_t0	2023-05-16 18:29:13 +01:00
fjosw	ba6cc09814	Merge branch 'develop' into documentation	2023-05-16 17:28:53 +00:00
Justus Kuhlmann	5155effbbf	Fix/sort names (#177) ... * cosmetic fix in sort_names * bug fix, more tests	2023-05-16 18:28:32 +01:00
fjosw	1800790b19	Merge branch 'develop' into documentation	2023-05-03 14:31:18 +00:00
s-kuberski	15d07de87f	fix: String conversion of Obs can now handle a dvalue that is NaN or inf (#173)	2023-05-03 16:30:59 +02:00
fjosw	00961c151a	Merge branch 'develop' into documentation	2023-04-28 17:15:13 +00:00
s-kuberski	65a9128a7d	Fix/merge idx (#172) ... * Fix: Corrected merging of idls * Fix: Computation of drho in cases where tau_int is large compared to the chain length * Removed unnecessary imports * Refactor list comparisons in obs.py	2023-04-28 18:14:51 +01:00
fjosw	f4e0bd1d7e	Merge branch 'develop' into documentation	2023-04-20 16:34:23 +00:00
Fabian Joswig	be061fdc23	Feat/str format (#170) ... * feat: _format_uncertainty now accepts a significance. * feat: __format__ now accepts significance. * feat: explicit + sign added to format. * fix: - option removed from format specifier. * feat: space format added.	2023-04-20 17:31:37 +01:00
fjosw	48694ee539	Merge branch 'develop' into documentation	2023-04-20 16:31:18 +00:00
s-kuberski	a214465413	Fix/gaps (#169) ... * fix: Fixed range detection in gamma_method * Corrected test in dobsio * Changed expansion paradigm in gamma_method * Extended tests * Updated docstrings * Removed unnecessary intermediate variable * Removed unnecessary code * Fixed previously introduced bug in output in obs.details() * Fixed previously introduced bug in window determination * New criterion for matching gapped replica, fixed determination of w_max and fixed tau_exp analysis with gaps * tests: split up consistency test for gamma method. --------- Co-authored-by: Fabian Joswig <fabian.joswig@ed.ac.uk>	2023-04-20 17:30:57 +01:00
fjosw	24d572c979	Merge branch 'develop' into documentation	2023-03-17 13:52:30 +00:00
nils-ht	2363b755dd	NHT changes plots combined fit (#166) ... * NHT changes plots combined fit * feat: Exception for illegal combination added and test fixed. --------- Co-authored-by: Fabian Joswig <fabian.joswig@ed.ac.uk>	2023-03-17 13:52:07 +00:00
fjosw	3cc244e546	Merge branch 'develop' into documentation	2023-03-16 13:12:25 +00:00
Justus Kuhlmann	83204ce794	fixed appended mode reading (#165)	2023-03-16 13:12:03 +00:00
fjosw	8186f5cb6b	Merge branch 'develop' into documentation	2023-03-15 17:46:38 +00:00
Justus Kuhlmann	41fec09816	Impr/fix refactor sfcf read (#164) ... * refactor read_sfcf * adding tests for find_corr and read_compact_file * add necessary broken data for tests * fixed appended mode reading * factored out sort_names and find_files * now also using sort_files in sfcf.py * edited tests to fit with new structure * added find_files function * shifted helpfunctions to bottom of file * removed some debug lines * linting * Fixed requested changes, added silent mode * added Exception if correlator is not found by read_append_rep * use tmp_path fixture * linting silent keyword * try to fix testing for a_bb * tests: Exception testing in test_find_corr made more explicit. --------- Co-authored-by: Fabian Joswig <fabian.joswig@ed.ac.uk>	2023-03-15 17:46:12 +00:00
fjosw	b27c2a1f94	Merge branch 'develop' into documentation	2023-03-10 14:17:41 +00:00
Fabian Joswig	3c942b380d	Serialize list of Obs in pandas.to_sql (#162) ... * feat: Added serialization of list of Obs in pandas.to_sql. * tests: test for list of Obs to sql added. * feat: auto_gamma functionality added for deserialization of lists of Obs.	2023-03-10 14:17:20 +00:00
fjosw	6fbf4d30c4	Merge branch 'develop' into documentation	2023-03-09 15:33:17 +00:00
Fabian Joswig	a7a098b861	fix: chisquare, dof and p-value also calculated when dof is 0. Test for ... dof and chisquare_over_dof added.	2023-03-09 15:32:27 +00:00
Fabian Joswig	06ba2015be	tests: test for different methods in prior fit added.	2023-03-09 15:00:52 +00:00
fjosw	8f36de348d	Merge branch 'develop' into documentation	2023-03-08 16:46:09 +00:00