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[Fix] Migrate to odrpack because of scipy.odr deprecation (#279)
* [Fix] Migrate to odrpack because of scipy.odr deprecation in recent release * [Fix] Fix behaviour for rank deficient fits. Add test * [Fix] Relax test_merge_obs tolerance to machine epsilon and update ODR docstring to reference odrpack * [ci] Re-add -Werror to pytest workflow * [Fix] Handle platform-dependent rank-deficient warning in ODR tests * [Fix] Improve rank-deficient detection and bump odrpack to >=0.5 Fix incorrect ODRPACK95 info code parsing: rank deficiency is encoded in the tens digit (info // 10 % 10), not the hundreds digit. Add irank and inv_condnum to the warning message for diagnostics.
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6 changed files with 119 additions and 44 deletions
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setup.py
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setup.py
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@ -25,7 +25,7 @@ setup(name='pyerrors',
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license="MIT",
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packages=find_packages(),
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python_requires='>=3.10.0',
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install_requires=['numpy>=2.0', 'autograd>=1.7.0', 'numdifftools>=0.9.41', 'matplotlib>=3.9', 'scipy>=1.13', 'iminuit>=2.28', 'h5py>=3.11', 'lxml>=5.0', 'python-rapidjson>=1.20', 'pandas>=2.2'],
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install_requires=['numpy>=2.0', 'autograd>=1.7.0', 'numdifftools>=0.9.41', 'matplotlib>=3.9', 'scipy>=1.13', 'iminuit>=2.28', 'h5py>=3.11', 'lxml>=5.0', 'python-rapidjson>=1.20', 'pandas>=2.2', 'odrpack>=0.5'],
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extras_require={'test': ['pytest', 'pytest-cov', 'pytest-benchmark', 'hypothesis', 'nbmake', 'flake8']},
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classifiers=[
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'Development Status :: 5 - Production/Stable',
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