jkuhl/corrlib
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remove temporary non-datalad implementation

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This commit is contained in:
Justus Kuhlmann 2025-12-04 15:14:28 +01:00
commit bc57087a5a
Signed by: jkuhl
GPG key ID: 00ED992DD79B85A6
3 changed files with 53 additions and 40 deletions
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18
corrlib/main.py
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@ -6,7 +6,7 @@ from .git_tools import move_submodule
import shutil
from .find import _project_lookup_by_id
from .tools import list2str, str2list, get_db_file
from .tracker import get, save
from .tracker import get, save, unlock, init, clone, drop
from typing import Union, Optional
@ -34,7 +34,7 @@ def create_project(path: str, uuid: str, owner: Union[str, None]=None, tags: Uni
if known_projects.fetchone():
raise ValueError("Project already imported, use update_project() instead.")
dl.unlock(db, dataset=path)
unlock(path, db_file)
alias_str = ""
if aliases is not None:
alias_str = list2str(aliases)
@ -80,7 +80,7 @@ def update_aliases(path: str, uuid: str, aliases: list[str]) -> None:
if not len(new_alias_list) == len(known_alias_list):
alias_str = list2str(new_alias_list)
dl.unlock(db, dataset=path)
unlock(path, db_file)
update_project_data(path, uuid, "aliases", alias_str)
save(path, message="Updated aliases for project " + uuid, files=[db_file])
return
@ -113,12 +113,7 @@ def import_project(path: str, url: str, owner: Union[str, None]=None, tags: Opti
"""
tmp_path = os.path.join(path, 'projects/tmp')
if not isDataset:
dl.create(tmp_path, dataset=path)
shutil.copytree(url + "/*", path + '/projects/tmp/')
save(path, message="Created temporary project dataset", files=['projects/tmp'])
else:
dl.install(path=tmp_path, source=url, dataset=path)
clone(path, source=url, target=tmp_path)
tmp_ds = dl.Dataset(tmp_path)
conf = dlc.ConfigManager(tmp_ds)
uuid = str(conf.get("datalad.dataset.id"))
@ -126,9 +121,8 @@ def import_project(path: str, url: str, owner: Union[str, None]=None, tags: Opti
raise ValueError("The dataset does not have a uuid!")
if not os.path.exists(path + "/projects/" + uuid):
db_file = get_db_file(path)
db = os.path.join(path, db_file)
get(path, db_file)
dl.unlock(db, dataset=path)
unlock(path, db_file)
create_project(path, uuid, owner, tags, aliases, code)
move_submodule(path, 'projects/tmp', 'projects/' + uuid)
os.mkdir(path + '/import_scripts/' + uuid)
@ -151,6 +145,6 @@ def drop_project_data(path: str, uuid: str, path_in_project: str = "") -> None:
"""
Drop (parts of) a project to free up diskspace
"""
dl.drop(path + "/projects/" + uuid + "/" + path_in_project)
drop(path + "/projects/" + uuid + "/" + path_in_project)
return